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GC-box base frequency table and weigth matrix
| Position | -6 | -5 | -4 | -3 | -2 | -1 | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | |
| # A | 102 | 97 | 50 | 67 | 0 | 2 | 54 | 46 | 1 | 79 | 23 | 0 | 20 | 40 | |
| # C | 40 | 31 | 6 | 1 | 0 | 0 | 170 | 1 | 3 | 0 | 17 | 166 | 86 | 24 | |
| # G | 50 | 112 | 154 | 206 | 274 | 272 | 0 | 224 | 222 | 171 | 192 | 35 | 52 | 109 | |
| # T | 82 | 34 | 64 | 0 | 0 | 0 | 50 | 3 | 48 | 24 | 42 | 73 | 116 | 101 | |
| W(A) | 0.00 | 0.00 | -0.52 | -0.39 | -4.07 | -3.42 | -1.05 | -1.09 | -3.57 | -0.03 | -1.35 | -3.98 | -1.56 | -0.72 | |
| W(C) | -0.95 | -1.12 | -2.26 | -3.25 | -3.80 | -4.23 | 0.00 | -3.67 | -3.05 | -3.52 | -1.90 | 0.00 | -0.42 | -1.45 | |
| W(G) | -1.16 | -0.38 | 0.00 | 0.00 | 0.00 | 0.00 | -4.58 | 0.00 | 0.00 | 0.00 | 0.00 | -1.83 | -1.09 | -0.27 | |
| W(T) | -0.10 | -1.00 | -0.15 | -3.75 | -3.93 | -4.02 | -0.98 | -3.34 | -0.69 | -1.14 | -0.83 | -0.56 | 0.00 | 0.00 | |
| Consensus | a/t | a/g | g/t/a | G/a | G | G | C/t/a | G/a | G/t | g/a/t | g/t | c/t | t/c | t/g | |
| Preferred region: Position 0 between -164 and +1 relative to transcription start site. | Optimizid cut-off value: -4.90 (88.0%) | ||||||||||||||
Last update October 2019