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Inr-pfa motif logo

Inr-pfa motif logo

Inr-pfa weight matrix

Position

-05
-04
-03
-02
-01
 00
 01
 02
 03
 04
 05
  A       C       G       T

-0.61   -0.35   -1.04    0.00
-0.39   -0.97   -0.52    0.00
-1.05   -0.68   -0.73    0.00
-1.20   -0.27   -1.00    0.00
-5.16    0.00   -5.16   -0.76
-0.54   -5.19    0.00   -5.19
-0.32   -0.38   -0.04    0.00
-0.92   -0.69    0.00   -1.82
-0.99   -0.29    0.00   -1.19
-0.57   -0.31    0.00   -0.98
-0.55   -0.16    0.00   -0.66


Reference position: 0 (sixth in the matrix)

Optimized cut-off value: -5.21 (73.47%)

Expected location: at the TSS

Last update October 2019